Search results for "Functional redundancy"

showing 7 items of 7 documents

High microbial diversity promotes soil ecosystem functioning

2018

ABSTRACT In soil, the link between microbial diversity and carbon transformations is challenged by the concept of functional redundancy. Here, we hypothesized that functional redundancy may decrease with increasing carbon source recalcitrance and that coupling of diversity with C cycling may change accordingly. We manipulated microbial diversity to examine how diversity decrease affects the decomposition of easily degradable (i.e., allochthonous plant residues) versus recalcitrant (i.e., autochthonous organic matter) C sources. We found that a decrease in microbial diversity (i) affected the decomposition of both autochthonous and allochthonous carbon sources, thereby reducing global CO 2 e…

0301 basic medicineMicrobial diversitySoil biodiversity[SDV]Life Sciences [q-bio]carbon mineralizationApplied Microbiology and BiotechnologyEcosystem servicesNutrient[ SDV.MP ] Life Sciences [q-bio]/Microbiology and ParasitologyEnvironmental MicrobiologySoil Microbiology2. Zero hungerchemistry.chemical_classificationEcologyEcologyredundancyMicrobiota04 agricultural and veterinary sciencesrespiratory systemfunctional redundancy[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyBiotechnologypriming effect[ SDV.SA.SDS ] Life Sciences [q-bio]/Agricultural sciences/Soil studyContext (language use)[SDV.BID]Life Sciences [q-bio]/Biodiversity[SDV.SA.SDS]Life Sciences [q-bio]/Agricultural sciences/Soil studyCarbon cycle03 medical and health sciencessoil organic matterOrganic matterEcosystem14. Life underwaterEcosystem[ SDV.BID ] Life Sciences [q-bio]/BiodiversityBacteria[ SDV ] Life Sciences [q-bio]Soil organic matterFungi15. Life on landCarbonfunctional030104 developmental biologychemistry13. Climate actionmicrobial diversity040103 agronomy & agriculture0401 agriculture forestry and fisheriesEnvironmental sciencehuman activitiesFood Science
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Functional Redundancy-Induced Stability of Gut Microbiota Subjected to Disturbance.

2016

The microbiota should be considered as just another component of the human epigenetic landscape. Thus, health is also a reflection of the diversity and composition of gut microbiota and its metabolic status. In defining host health, it remains unclear whether diversity is paramount, or whether greater weight is held by gut microbiota composition or mono- or multiple-functional capacity of the different taxa and the mechanisms involved. A network-biology approach may shed light on the key gut players acting to protect against, or promote, disorders or diseases. This could be achieved by integrating data on total and active species, proteins and molecules, and their association with host resp…

0301 basic medicineMicrobiology (medical)Gastrointestinal Diseases030106 microbiologyHost responseGut floradigestive systemMicrobiology03 medical and health sciencesVirologymedicineAnimalsHumansEpigeneticsbiologyEcologyFunctional redundancyGastrointestinal MicrobiomeBiodiversitybiology.organism_classificationmedicine.diseaseBiotaGastrointestinal MicrobiomeGastrointestinal Tract030104 developmental biologyInfectious DiseasesDisturbance (ecology)Evolutionary biologyDysbiosisTrends in microbiology
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Engineered Functional Redundancy Relaxes Selective Constraints upon Endogenous Genes in Viral RNA Genomes

2018

Functional redundancy, understood as the functional overlap of different genes, is a double-edge sword. At the one side, it is thought to serve as a robustness mechanism that buffers the deleterious effect of mutations hitting one of the redundant copies, thus resulting in pseudogenization. At the other side, it is considered as a source of genetic and functional innovation. In any case, genetically redundant genes are expected to show an acceleration in the rate of molecular evolution. Here, we tackle the role of functional redundancy in viral RNA genomes. To this end, we have evaluated the rates of compensatory evolution for deleterious mutations affecting an essential function, the suppr…

0301 basic medicinePotyvirusEndogenyComputational biologyGenome ViralGenomeExperimental virus evolutionViral suppressors of RNA silencingEvolution Molecular03 medical and health sciencesGeneticsRNA VirusesViral rnaGeneEcology Evolution Behavior and SystematicsCompensatory evolutionPlant DiseasesbiologyTobacco etch virusFunctional redundancyMultifunctional proteinsPlantsbiology.organism_classificationGenetic redundancyTobacco etch virus030104 developmental biologyMutationGenetic redundancyRNA ViralRNA InterferencePseudogenesResearch Article
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Cross-regional view of functional and taxonomic microbiota composition in obesity and post-obesity treatment shows country specific microbial contrib…

2019

This work was supported by CONICYT-Chile through the FONDECYT [n° 3160525] (DM) and by Universidad San Sebastián, and by grants to AM from the Spanish Ministry of Economy and Competitiveness (projects SAF2012-31187, SAF2013-49788-EXP, SAF2015-65878-R), Carlos III Health Institute (Projects PIE14/00045 and AC15/00022), Generalitat Valenciana (Project PrometeoII/2014/065 and Prometeo/2018/A/133), Asociación Española Contra el Cancer (Project AECC 2017-1485) and co-financed by the European Regional Development Fund (ERDF).

Microbiology (medical)obesitybariatric surgerylcsh:QR1-502Context (language use)Gut floraMicrobiologydigestive systemlcsh:MicrobiologyFunctional redundancy03 medical and health sciencesMetagenomicWeight losshuman gut microbiotamedicineObesitymetagenomicOriginal Research030304 developmental biologyGeneticsBariatric surgery0303 health sciencesbiology030306 microbiologyMicrobiotaFunctional redundancyfunctional convergencebiology.organism_classificationmedicine.diseaseObesityfunctional redundancyMetagenomicsObesitatmedicine.symptomDysbiosisAkkermansia muciniphilaFunctional convergenceHuman gut microbiota
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Functional Redundancy and Complementarities of Seed Dispersal by the Last Neotropical Megafrugivores

2013

Submitted by Vitor Silverio Rodrigues (vitorsrodrigues@reitoria.unesp.br) on 2014-05-27T11:28:22Z No. of bitstreams: 0Bitstream added on 2014-05-27T14:42:48Z : No. of bitstreams: 1 2-s2.0-84873586375.pdf: 1508075 bytes, checksum: 7e697f6c67a83195e9b0cb525355980e (MD5) Made available in DSpace on 2014-05-27T11:28:22Z (GMT). No. of bitstreams: 0 Previous issue date: 2013-02-07 Background: Functional redundancy has been debated largely in ecology and conservation, yet we lack detailed empirical studies on the roles of functionally similar species in ecosystem function. Large bodied frugivores may disperse similar plant species and have strong impact on plant recruitment in tropical forests. Th…

Settore AGR/05 - Assestamento Forestale E SelvicolturaSettore BIO/05 - Zoologialcsh:MedicinePlant Scienceredundancy analysisCryptocaryaTreesBehavioral EcologyFood Web StructureSeed DispersalForest structurequantitative studylcsh:Sciencetapirforest fragmentationplant dispersalMultidisciplinaryEcologyEcologyMedicine (all)Functional redundancyMarine EcologyBiodiversityPlantsCommunity EcologySeedsBrazilTreeResearch Articleforest structureSettore BIO/07 - EcologiaNeotropicsspecies comparisonSeed dispersalEcological and Environmental PhenomenaGerminationForest fragmentationBiologyFrugivoreAnimals; Brazil; Cryptocarya; Ferns; Germination; Spatial Analysis; Trees; Atelinae; Ecological and Environmental Phenomena; Herbivory; Perissodactyla; Seed Dispersal; Agricultural and Biological Sciences (all); Biochemistry Genetics and Molecular Biology (all); Medicine (all)FernAnimalscontrolled studyHerbivoryPlant DispersalBiologyseed sizeSpecies ExtinctionPerissodactylaplant leafEvolutionary BiologySpatial AnalysisAtelinaenonhumanBiochemistry Genetics and Molecular Biology (all)AnimalPlant Ecologymuriquilcsh:RRestoration EcologySpatial AnalysiEcological and Environmental ProcessesAgricultural and Biological Sciences (all)frugivoreSettore BIO/03 - Botanica Ambientale E ApplicataFernslcsh:Qqualitative research
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Etude structure/fonction du demi-transporteur ABCD2 dans le contexte de l'Adrénoleucodystrophie liée à l'X

2013

X-linked Adrenoleukodystrophy (X-ALD) is a rare neurodegenerative disease caused by deficiency of the peroxisomal half-transporter ABCD1, implicated in very long chain fatty acids import. Two additional half-transporters are located in the peroxisomal membrane: ABCD2 and ABCD3. Over-expression of ABCD2 is known to compensate for ABCD1 deficiency, making ABCD2 a therapeutic target for X-ALD treatment. In this context, the main objective of my thesis was to investigate the function and the structure of ABCD2, and more broadly, of peroxisomal ABC transporters.Half-transporters must at least dimerize to form a functional transporter. Alternative dimerization could modulate substrate specificity…

X-ALD[ SDV.BC ] Life Sciences [q-bio]/Cellular BiologyOligomérisation[SDV.BC]Life Sciences [q-bio]/Cellular BiologyPeroxisomeFunctional redundancyTransporteurs ABCABC transportersRedondance fonctionnelle[SDV.BBM] Life Sciences [q-bio]/Biochemistry Molecular BiologyOligomerization[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyDimères ABC chimériquesPeroxysome[ SDV.BBM ] Life Sciences [q-bio]/Biochemistry Molecular BiologyChimeric ABC dimers[SDV.BC] Life Sciences [q-bio]/Cellular Biology
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Loss in microbial diversity affects nitrogen cycling in soil

2013

International audience; Microbial communities have a central role in ecosystem processes by driving the Earth's biogeochemical cycles. However, the importance of microbial diversity for ecosystem functioning is still debated. Here, we experimentally manipulated the soil microbial community using a dilution approach to analyze the functional consequences of diversity loss. A trait-centered approach was embraced using the denitrifiers as model guild due to their role in nitrogen cycling, a major ecosystem service. How various diversity metrics related to richness, eveness and phylogenetic diversity of the soil denitrifier community were affected by the removal experiment was assessed by 454 s…

[SDE] Environmental Sciencesdénitrification[SDV]Life Sciences [q-bio]Biodiversitybiodiversitécycle de l'azotenitrogen cycling[SDV.BV] Life Sciences [q-bio]/Vegetal BiologyPhylogenySoil Microbiology2. Zero hunger0303 health sciencesEcology04 agricultural and veterinary sciencesBiodiversityrespiratory systemNitrogen Cyclefunctional redundancy[SDV] Life Sciences [q-bio]ecosystem functioning[SDE]Environmental SciencesDenitrificationTerrestrial ecosystemOriginal ArticleOxidoreductases[SDU.STU]Sciences of the Universe [physics]/Earth Sciencesfonctionnement des écosystèmesBiologyMicrobiologysoil03 medical and health sciencesMicrobial ecologyProteobacteria[SDV.BV]Life Sciences [q-bio]/Vegetal Biologyredondance fonctionnelleEcosystemNitrogen cycleEcology Evolution Behavior and Systematics030304 developmental biologyBacteria15. Life on landModels TheoreticalArchaeaBacterial LoadPhylogenetic diversityMicrobial population biology040103 agronomy & agriculture0401 agriculture forestry and fisheriesSpecies richnesshuman activities
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